miRBase entry: ppy-mir-411

Stem-loop ppy-mir-411


Accession
MI0014935
Description
Pongo pygmaeus ppy-mir-411 precursor miRNA


Sequence

ugguacuuggagagaUAGUAGACCGUAUAGCGUACGcuuuaucugugacguauguaacacgguccacuaacccucaguaucaaauccauccccgag
(((((((..(((.(.((((.((((((...((((((((.........).)))))))...)))))).)))).).))))))))))..............

Structure
--------------       ug   a a    A      AUA       - uuu 
              ugguacu  gag g UAGU GACCGU   GCGUACG c   a
              |||||||  ||| | |||| ||||||   ||||||| |   u
              acuauga  cuc c auca cuggca   uguaugc g   c
gagccccuaccuaa       --   c a    c      caa       a ugu 


Annotation confidence Not enough data
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Genome context
chr14: 102584737-102584832 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from ppy-mir-411
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-411

Accession MIMAT0015878
Description Pongo pygmaeus ppy-miR-411 mature miRNA
Sequence 16 - UAGUAGACCGUAUAGCGUACG - 36
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64