miRBase entry: ppy-mir-425

Stem-loop ppy-mir-425

Accession

MI0014941

Description

Pongo pygmaeus ppy-mir-425 precursor miRNA

Sequence

gaaagcgcuuuggAAUGACACGAUCACUCCCGUUGAgugggcacccgagaagccaucgggaaugucguguccgcccagugcucuuuc
(((((.((.((((...(((((((.((.(((((....((((............))))))))).)))))))))...)))).)).)))))

Structure

     c  u    AAU       U  C     UUGA    gcacc 
gaaag gc uugg   GACACGA CA UCCCG    gugg     c
||||| || ||||   ||||||| || |||||    ||||      
cuuuc cg gacc   cugugcu gu agggc    uacc     g
     u  u    cgc       -  a     ----    gaaga

Annotation confidence Not enough data

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Genome context

chr3: 97473537-97473623 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-425

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-425

Accession	MIMAT0015885
Description	Pongo pygmaeus ppy-miR-425 mature miRNA
Sequence	14 - AAUGACACGAUCACUCCCGUUGA - 36
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64