miRBase entry: ppy-mir-431

Stem-loop ppy-mir-431

Accession

MI0014943

Description

Pongo pygmaeus ppy-mir-431 precursor miRNA

Sequence

uccugcuuguccugcgaggUGUCUUGCAGGCCGUCAUGCAggccacacugacgguaacguugcaggucgucuugcagggcuucucgcaagacgacauccucaucaccaacgacg
...((.(((((.(((((((.((((((((((.((.(.((((((((........)))....))))).).)).)))))))))).))))))).)))))))..................

Structure

---------------ucc  c     c       U          C  U A     ----   aca 
                  ug uuguc ugcgagg GUCUUGCAGG CG C UGCAg    gcc   c
                  || ||||| ||||||| |||||||||| || | |||||    |||    
                  ac agcag acgcucu cgggacguuc gc g acguu    ugg   u
gcagcaaccacuacuccu  -     a       u          u  u g     gcaa   cag

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr14: 102426387-102426500 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ppy-mir-431

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-431

Accession	MIMAT0015887
Description	Pongo pygmaeus ppy-miR-431 mature miRNA
Sequence	20 - UGUCUUGCAGGCCGUCAUGCA - 40
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64