miRBase entry: ppy-mir-433

Stem-loop ppy-mir-433

Accession

MI0014945

Description

Pongo pygmaeus ppy-mir-433 precursor miRNA

Sequence

ccggggagaaguacggugagccugucauuauucagagaggcuagauccucuguguugagaaggAUCAUGAUGGGCUCCUCGGUGUucuccagg
((..((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...)))))).))

Structure

  gg      gua   u           u   --------  g     cu 
cc  ggagaa   cgg gagccugucau auu        ca agagg  a
||  ||||||   ||| ||||||||||| |||        || |||||   
gg  ccucuU   GCU CUCGGGUAGUA UAg        gu ucucc  g
  -a      GUG   C           C   gaagaguu  g     ua

Annotation confidence Not enough data

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Genome context

chr14: 102427266-102427358 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ppy-mir-433

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-433

Accession	MIMAT0015889
Description	Pongo pygmaeus ppy-miR-433 mature miRNA
Sequence	64 - AUCAUGAUGGGCUCCUCGGUGU - 85
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64