miRBase entry: ppy-mir-448

Stem-loop ppy-mir-448


Accession
MI0014946
Description
Pongo pygmaeus ppy-mir-448 precursor miRNA


Sequence

gccgggagguugaacauccugcauagugcugccaggaaaucccuauuucauauaagagggggcuggcuggUUGCAUAUGUAGGAUGUCCCAUcucccagcccacuucguca
((.(((((((.(.((((((((((((.(((.(((((....(((((.((......)).))))).....))))).))))))))))))))).).))))))).))...........

Structure
-----------  c       u a            g   u     -gaaa     a  uc 
           gc gggaggu g acauccugcaua ugc gccag     ucccu uu  a
           || ||||||| | |||||||||||| ||| |||||     ||||| ||   
           cg cccucUA C UGUAGGAUGUAU ACG Ugguc     gggga aa  u
acugcuucacc  a       C C            -   U     ggucg     g  ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 113777748-113777858 [+]

Database links

Mature ppy-miR-448

Accession MIMAT0015890
Description Pongo pygmaeus ppy-miR-448 mature miRNA
Sequence 71 - UUGCAUAUGUAGGAUGUCCCAU - 92
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64