miRBase entry: ppy-mir-449a

Stem-loop ppy-mir-449a

Accession

MI0014947

Description

Pongo pygmaeus ppy-mir-449a precursor miRNA

Sequence

cugugugugaugagcUGGCAGUGUAUUGUUAGCUGGUugaauaugugaauggcaucggcuaacgugcaacugcugucuuauugcauauaca
.(((((((((((((.(((((((((((.((((((((((.(..(((....))).))))))))))))))).))))))).)))))))))))))..

Structure

-c             c       -    U          u aa   g 
  ugugugugaugag UGGCAGU GUAU GUUAGCUGGU g  uau u
  ||||||||||||| ||||||| |||| |||||||||| |  |||  
  auauacguuauuc gucguca cgug caaucggcua c  gua g
ac             u       a    -          - -g   a

Annotation confidence Not enough data

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Genome context

chr5: 56431748-56431838 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-449a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-449a

Accession	MIMAT0015891
Description	Pongo pygmaeus ppy-miR-449a mature miRNA
Sequence	16 - UGGCAGUGUAUUGUUAGCUGGU - 37
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64