Stem-loop ppy-mir-450a-1

Accession

MI0014949

Description

Pongo pygmaeus ppy-mir-450a-1 precursor miRNA

Sequence

aaacgauacuaaacuguUUUUGCGAUGUGUUCCUAAUAugcacaauaaauauauugggaacauuuugcauguauaguuugguaucaauaua
....(((((((((((((...(((((.((((((((((((((.........)))))))))))))).)))))...)))))))))))))......

Structure

--aaac             UUU     U              cac 
      gauacuaaacugu   UGCGA GUGUUCCUAAUAug   a
      |||||||||||||   ||||| ||||||||||||||   a
      cuaugguuugaua   acguu uacaaggguuauau   u
auauaa             ugu     u              aaa 

Annotation confidence Not enough data

Genome context

chrX: 133999582-133999672 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from ppy-mir-450a-1

Mature ppy-miR-450a

• Accession: MIMAT0015893
• Description: Pongo pygmaeus ppy-miR-450a mature miRNA
• Sequence: 18 - UUUUGCGAUGUGUUCCUAAUA - 38
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64