miRBase entry: ppy-mir-489

Stem-loop ppy-mir-489

Accession

MI0014962

Description

Pongo pygmaeus ppy-mir-489 precursor miRNA

Sequence

guggcagcuugguggucguauguguggcgccauuuacuugaaccuuuaggaGUGACAUCACAUAUACGGCAGCuaaacugcuac
(((((((.(((((.(((((((((((((.(.((((..(((((....))))))))).).))))))))))))).))))).)))))))

Structure

       c     g             c c    ua     a 
guggcag uuggu gucguaugugugg g cauu  cuuga c
||||||| ||||| ||||||||||||| | ||||  |||||  
caucguc aauCG CGGCAUAUACACU C GUGa  ggauu c
       a     A             A A    --     u

Annotation confidence Not enough data

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Genome context

chr7: 82622602-82622685 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-489

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-489

Accession	MIMAT0015908
Description	Pongo pygmaeus ppy-miR-489 mature miRNA
Sequence	52 - GUGACAUCACAUAUACGGCAGC - 73
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64