miRBase entry: ppy-mir-498

Stem-loop ppy-mir-498

Accession

MI0014971

Description

Pongo pygmaeus ppy-mir-498 precursor miRNA

Sequence

aacccuccuugggaagugaagcucaggcugugaUUUCAAGCCAGGGGGCGUUUUUCuguaacuggaugaaaagcaccuccagggcuugaagcucacaguuugagagcaaucgucuaacgaaguu
..(((.....)))........(((((((((((((((((((((.(((((.(((((((...........))))))).)))))..))))))))).)))))))))))).....((((...))))....

Structure

aacccuccuugggaagugaag            -         -A     C       ugua 
                     cucaggcuguga UUUCAAGCC  GGGGG GUUUUUC    a
                     |||||||||||| |||||||||  ||||| |||||||    c
                     gaguuugacacu gaaguucgg  ccucc cgaaaag    u
-uugaagcaaucugcuaacga            c         ga     a       uagg

Annotation confidence Not enough data

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Genome context

chr19: 55448578-55448701 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ppy-mir-498

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-498

Accession	MIMAT0015919
Description	Pongo pygmaeus ppy-miR-498 mature miRNA
Sequence	34 - UUUCAAGCCAGGGGGCGUUUUUC - 56
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64