miRBase entry: ppy-mir-505

Stem-loop ppy-mir-505


Accession
MI0014978
Description
Pongo pygmaeus ppy-mir-505 precursor miRNA


Sequence

gaugcacccagugggggagccaggaaguauugauguuucugccaguuuagCGUCAACACUUGCUGGUUUCCUcucuggagcau
.((((..((((.(((((((((((.((((.((((((((...........)))))))).)))).))))))))))).)))).))))

Structure
g    ac    u           g    a        ucug 
 augc  ccag gggggagccag aagu uugauguu    c
 ||||  |||| ||||||||||| |||| ||||||||    c
 uacg  gguc cUCCUUUGGUC UUCA AACUGCga    a
-    -a    u           G    C        uuug 


Annotation confidence Not enough data
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Genome context
chrX: 139575141-139575223 [-]

Database links

Mature ppy-miR-505

Accession MIMAT0015928
Description Pongo pygmaeus ppy-miR-505 mature miRNA
Sequence 51 - CGUCAACACUUGCUGGUUUCCU - 72
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64