miRBase entry: ppy-mir-512-2

Stem-loop ppy-mir-512-2

Accession

MI0014989

Description

Pongo pygmaeus ppy-mir-512-2 precursor miRNA

Sequence

gguacuucucagucuguggcgcucagccuugggggcacuuucuggugccagaaugaAAGUGCUGUCAUAGCUGAGGUCcaaugacugaggcgagcacc
(((.((((((((((..(((..((((((..(((.(((((((((............))))))))).)))..))))))..)))..)))))))..))).)))

Structure

   a   --       ug   cg      cu   g         uggug 
ggu cuu  cucaguc  ugg  cucagc  ugg ggcacuuuc     c
||| |||  |||||||  |||  ||||||  ||| |||||||||      
cca gag  gagucag  acC  GAGUCG  ACU UCGUGAAag     c
   c   cg       ua   UG      AU   G         uaaga

Annotation confidence Not enough data

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Genome context

chr19: 55444850-55444947 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ppy-mir-512-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-512-3p

Accession	MIMAT0015937
Description	Pongo pygmaeus ppy-miR-512-3p mature miRNA
Sequence	57 - AAGUGCUGUCAUAGCUGAGGUC - 78
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64