miRBase entry: ppy-mir-514

Stem-loop ppy-mir-514

Accession

MI0014994

Description

Pongo pygmaeus ppy-mir-514 precursor miRNA

Sequence

aacauguugucugugguacccuacucuggagaguggcaaucauguguaauuaaauuugAUUGACACCUCUGUGAGUAGAguaacgcaugacacauacg
...((((.(((((((.(((.(((((((((((.(((.((((((.((........)).)))))).)))))))).)))))).))).)))).)))))))...

Structure

aac    u   -    g   c      -     a   g      u  gua 
   augu guc ugug uac cuacuc uggag gug caauca gu   a
   |||| ||| |||| ||| |||||| ||||| ||| |||||| ||    
   uaca cag acgc aug GAUGAG GUCUC CAC GUUAgu ua   u
gca    -   u    a   A      U     -   A      u  aau

Annotation confidence Not enough data

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Genome context

chrX: 147162781-147162878 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-514

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-514

Accession	MIMAT0015942
Description	Pongo pygmaeus ppy-miR-514 mature miRNA
Sequence	59 - AUUGACACCUCUGUGAGUAGA - 79
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64