Stem-loop ppy-mir-515-1

Accession

MI0014997

Description

Pongo pygmaeus ppy-mir-515-1 precursor miRNA

Literature search

1 open access papers mention ppy-mir-515-1
(2 sentences)

Sequence

ucucaugcagucaUUCUCCAAAAGAAAGCACUUUCUGuugucugaaagcaGAGUGCCUUCUUUUGGAGCGUUacuguuugaga
(((((.(((((.((.(((((((((((.((((..((((((.......)))))))))).))))))))))).)).))))).)))))

Structure

     u     c  U           A    UU      gu 
ucuca gcagu aU CUCCAAAAGAA GCAC  UCUGuu  c
||||| ||||| || ||||||||||| ||||  ||||||  u
agagu uguca UG GAGGUUUUCUU CGUG  AGacga  g
     u     U  C           C    --      aa 

Annotation confidence Not enough data

Genome context

chr19: 55460257-55460339 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ppy-mir-515-1

Mature ppy-miR-515-5p

• Accession: MIMAT0015943
• Description: Pongo pygmaeus ppy-miR-515-5p mature miRNA
• Sequence: 14 - UUCUCCAAAAGAAAGCACUUUCUG - 37
• Evidence: not_experimental

Mature ppy-miR-515-3p

• Accession: MIMAT0015944
• Description: Pongo pygmaeus ppy-miR-515-3p mature miRNA
• Sequence: 51 - GAGUGCCUUCUUUUGGAGCGUU - 72
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64