miRBase entry: ppy-mir-517a

Stem-loop ppy-mir-517a

Accession

MI0015003

Description

Pongo pygmaeus ppy-mir-517a precursor miRNA

Sequence

ucucaggcagugacccucuagauggaagcacugucuguuguauaaaagaaaagAUCGUGCAUCCCUUUAGAGUGUuacuguuugaga
((((((((((((((.(((((((.(((.((((.((((...............)))).)))).))).))))))).))))))))))))))

Structure

              c       u   a    u    guugua 
ucucaggcagugac cucuaga gga gcac gucu      u
|||||||||||||| ||||||| ||| |||| ||||      a
agaguuugucauUG GAGAUUU CCU CGUG UAga      a
              U       C   A    C    aaagaa

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr19: 55485875-55485961 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from ppy-mir-517a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-517a

Accession	MIMAT0015948
Description	Pongo pygmaeus ppy-miR-517a mature miRNA
Sequence	54 - AUCGUGCAUCCCUUUAGAGUGU - 75
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64