miRBase entry: ppy-mir-519d

Stem-loop ppy-mir-519d

Accession

MI0015017

Description

Pongo pygmaeus ppy-mir-519d precursor miRNA

Sequence

caugcugugacccuccaaagggaagcacuuccuguuuguuuucucuucaaCAAAGUGCCUCCCUUUAGAGUGuuaccguuuggga
((.((.(((((.(((.(((((((.((((((..((((.(........).)))))))))).))))))).))).))))).)).))...

Structure

---  u  u     c   c       a      cc    u uuu 
   ca gc gugac cuc aaaggga gcacuu  uguu g   u
   || || ||||| ||| ||||||| ||||||  |||| |    
   gu ug cauuG GAG UUUCCCU CGUGAA  ACaa u   c
agg  u  c     U   A       C      --    c ucu

Annotation confidence Not enough data

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Genome context

chr19: 55486957-55487041 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from ppy-mir-519d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-519d

Accession	MIMAT0015964
Description	Pongo pygmaeus ppy-miR-519d mature miRNA
Sequence	51 - CAAAGUGCCUCCCUUUAGAGUG - 72
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64