miRBase entry: ppy-mir-519e

Stem-loop ppy-mir-519e

Accession

MI0015018

Description

Pongo pygmaeus ppy-mir-519e precursor miRNA

Sequence

ucucaugcagucauucuccaaaagggaguacuuucuguugucugaaagaaaacaAAGUGCCUCCUUUUAGAGUGUUacuguuugaga
(((((.(((((.((.(((.(((((((.((((((..((((.(((...))).)))))))))).))))))).))).)).))))).)))))

Structure

     u     c  u   c       a      uc    g   g 
ucuca gcagu au cuc aaaaggg guacuu  uguu ucu  
||||| ||||| || ||| ||||||| ||||||  |||| ||| a
agagu uguca UG GAG UUUUCCU CGUGAA  acaa aga  
     u     U  U   A       C      --    a   a

Annotation confidence Not enough data

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Genome context

chr19: 55454916-55455002 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from ppy-mir-519e

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-519e

Accession	MIMAT0015965
Description	Pongo pygmaeus ppy-miR-519e mature miRNA
Sequence	55 - AAGUGCCUCCUUUUAGAGUGUU - 76
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64