miRBase entry: ppy-mir-520b

Stem-loop ppy-mir-520b

Accession

MI0015020

Description

Pongo pygmaeus ppy-mir-520b precursor miRNA

Sequence

cccucuacagggaagcacuuucuguugucugaaagaaaagAAAGUGCUUCCUUGUAGAGGG
(((((((((((((((((((((((....(((...)))..)))))))))))))))))))))))

Structure

                       guug   g 
cccucuacagggaagcacuuucu    ucu  
|||||||||||||||||||||||    ||| a
GGGAGAUGUUCCUUCGUGAAAga    aga  
                       --aa   a

Annotation confidence Not enough data

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Genome context

chr19: 55476981-55477041 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from ppy-mir-520b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-520b

Accession	MIMAT0015968
Description	Pongo pygmaeus ppy-miR-520b mature miRNA
Sequence	41 - AAAGUGCUUCCUUGUAGAGGG - 61
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64