miRBase entry: ppy-mir-521-1

Stem-loop ppy-mir-521-1

Accession

MI0015027

Description

Pongo pygmaeus ppy-mir-521-1 precursor miRNA

Sequence

ucucaugcugugacccuccaaagggaagaacuuucuguugucuaaaagaaaagAACGCACUUCCCUUUAGAGUGUuaccgugugaga
((((((((.(((((.(((.(((((((((..(.((((....(((...)))..)))).)..))))))))).))).))))).))))))))

Structure

        u     c   c         aa u    guug   a 
ucucaugc gugac cuc aaagggaag  c uucu    ucu  
|||||||| ||||| ||| |||||||||  | ||||    ||| a
agagugug cauUG GAG UUUCCCUUC  G AAga    aga  
        c     U   A         AC C    --aa   a

Annotation confidence Not enough data

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Genome context

chr19: 55526919-55527005 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ppy-mir-521-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-521

Accession	MIMAT0015977
Description	Pongo pygmaeus ppy-miR-521 mature miRNA
Sequence	54 - AACGCACUUCCCUUUAGAGUGU - 75
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64