miRBase entry: ppy-mir-521-2

Stem-loop ppy-mir-521-2

Accession

MI0015028

Description

Pongo pygmaeus ppy-mir-521-2 precursor miRNA

Sequence

ucucaggcugugacucuccaaagggaagaacuuucuguugucuaaaagaaaagaaaagAACGCACUUCCCUUUAGAGUGUuaccgugugaga
(((((.((.(((((.(((.(((((((((..(.((((....(((........)))..)))).)..))))))))).))).))))).)).)))))

Structure

     g  u     u   c         aa u    guug   aaa 
ucuca gc gugac cuc aaagggaag  c uucu    ucu   a
||||| || ||||| ||| |||||||||  | ||||    |||    
agagu ug cauUG GAG UUUCCCUUC  G AAga    aga   g
     g  c     U   A         AC C    --aa   aaa

Annotation confidence Not enough data

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Genome context

chr19: 55490265-55490356 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from ppy-mir-521-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-521

Accession	MIMAT0015977
Description	Pongo pygmaeus ppy-miR-521 mature miRNA
Sequence	59 - AACGCACUUCCCUUUAGAGUGU - 80
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64