Stem-loop ppy-mir-543

Accession

MI0015041

Description

Pongo pygmaeus ppy-mir-543 precursor miRNA

Sequence

uacuuaaugagaaguugcccguguuuuuuucgcuuuauuugugacgAAACAUUCGCGGUGCACUUCUUuuucaguauc
((((.((.(((((((.(((((((..(.((((((.........).))))).)..))))).))))))))).)).))))..

Structure

--    u  u       u  -     uu u     - uuu 
  uacu aa gagaagu gc ccgug  u uuucg c   a
  |||| || ||||||| || |||||  | ||||| |   u
  auga uu UUCUUCA CG GGCGC  A AAAgc g   u
cu    c  u       -  U     UU C     a ugu 

Annotation confidence Not enough data

Genome context

chr14: 102593436-102593513 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from ppy-mir-543

Mature ppy-miR-543

• Accession: MIMAT0015993
• Description: Pongo pygmaeus ppy-miR-543 mature miRNA
• Sequence: 47 - AAACAUUCGCGGUGCACUUCUU - 68
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64