Stem-loop ppy-mir-557

Accession

MI0015051

Description

Pongo pygmaeus ppy-mir-557 precursor miRNA

Sequence

agaaugggcaaaugaacaguaaauuuggaggccuggggcccucccugcugcuggagaaguGUUUGCAUGGGUGGGCCUUGUCUuugaaaggaggugga
....((..(....)..)).....(((((((((..(((((((.((((((((((.....))))...))).))).))))))))))))))))..........

Structure

agaaugggcaaaugaacaguaaa         cu       u   -   ---    g 
                       uuuggaggc  ggggccc ccc ugc   ugcu g
                       |||||||||  ||||||| ||| |||   |||| a
                       aaguuUCUG  UUCCGGG GGG ACG   Guga g
-------------agguggagga         --       U   U   UUU    a 

Annotation confidence Not enough data

Genome context

chr1: 82803839-82803936 [-]

Mature ppy-miR-557

• Accession: MIMAT0016004
• Description: Pongo pygmaeus ppy-miR-557 mature miRNA
• Sequence: 61 - GUUUGCAUGGGUGGGCCUUGUCU - 83
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64