Stem-loop ppy-mir-589

Accession

MI0015076

Description

Pongo pygmaeus ppy-mir-589 precursor miRNA

Sequence

uccagccugugcucaucggccccUGAGAACCACGUCUGCUCUGAGcuggguacugccuguucagaacaaacgcugguucccagacgcugccagcuggcc
.(((((.((.((.....(((..(((.(((((((((.((.(((((((.((......)).))))))).)).))).)))))).)))..))))))))))))..

Structure

-u     c  u  ucauc   cc   A      -   C  C       u  gu 
  ccagc ug gc     ggc  cUG GAACCA CGU UG UCUGAGc gg  a
  ||||| || ||     |||  ||| |||||| ||| || ||||||| ||   
  ggucg ac cg     ucg  gac cuuggu gca ac agacuug cc  c
cc     -  -  -----   ca   c      c   a  a       u  gu 

Annotation confidence Not enough data

Genome context

chr7: 5522331-5522429 [-]

Mature ppy-miR-589

• Accession: MIMAT0016031
• Description: Pongo pygmaeus ppy-miR-589 mature miRNA
• Sequence: 24 - UGAGAACCACGUCUGCUCUGAG - 45
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64