miRBase entry: ppy-mir-599

Stem-loop ppy-mir-599


Accession
MI0015085
Description
Pongo pygmaeus ppy-mir-599 precursor miRNA


Sequence

aaagacaugcuguccacaguguguuugauaagcugacaugggacagggauucuuuucacuGUUGUGUCAGUUUAUCAAACccauacuuggaugac
...........(((((.((((((((((((((((((((((..((((((((.....))).))))))))))))))))))))))..))))))))))...

Structure
aaagacaugcu     c     --                 gg     -   u 
           gucca agugu  guuugauaagcugacau  gacag gga u
           ||||| |||||  |||||||||||||||||  ||||| ||| c
           uaggu ucaua  CAAACUAUUUGACUGUG  UUGuc cuu u
--------cag     -     cc                 --     a   u 


Annotation confidence Not enough data
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Genome context
chr8: 106012522-106012616 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-599
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-599

Accession MIMAT0016041
Description Pongo pygmaeus ppy-miR-599 mature miRNA
Sequence 61 - GUUGUGUCAGUUUAUCAAAC - 80
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64