Stem-loop ppy-mir-623

Accession

MI0015107

Description

Pongo pygmaeus ppy-mir-623 precursor miRNA

Sequence

guacacaguagaagcGUCCCUUGCAGGGGCUGUUGGGUugcauccuaagcugugcuggagcuucccaauguacucuguagaugucuuugcaccuucug
.......(((((.(((((...(((((((..(((((((..((.(((..(((...))))))))..)))))))..)))))))))))).)))))........

Structure

-guacaca     a     CCU       GC       Uu  a   ua   u 
        guaga gcGUC   UGCAGGG  UGUUGGG  gc ucc  agc  
        ||||| |||||   |||||||  |||||||  || |||  ||| g
        cguuu uguag   augucuc  guaaccc  cg agg  ucg  
gucuucca     c     ---       au       uu  -   --   u 

Annotation confidence Not enough data

Genome context

chr13: 101696982-101697079 [+]

Mature ppy-miR-623

• Accession: MIMAT0016064
• Description: Pongo pygmaeus ppy-miR-623 mature miRNA
• Sequence: 16 - GUCCCUUGCAGGGGCUGUUGGGU - 38
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64