Stem-loop ppy-mir-646

Accession

MI0015122

Description

Pongo pygmaeus ppy-mir-646 precursor miRNA

Sequence

gaucaggagucugccacuggagucggcacgccugcuuuucagcugugaucccagaagaggAAGCGGCUGCCUCUGAGGCcucaggcucagu
......(((((((...((((((.((((.(((.(.((((((.............)))))).).))))))).)))).))....)))))))...

Structure

gaucag       -cca  -    u    a   c g      agcug 
      gagucug    cu ggag cggc cgc u cuuuuc     u
      |||||||    || |||| |||| ||| | ||||||     g
      cucggac    GA UCUC GUCG GCG A gagaag     a
---uga       ucCG  G    C    -   A g      acccu 

Annotation confidence Not enough data

Genome context

chr20: 58446603-58446693 [+]

Mature ppy-miR-646

• Accession: MIMAT0016080
• Description: Pongo pygmaeus ppy-miR-646 mature miRNA
• Sequence: 61 - AAGCGGCUGCCUCUGAGGC - 79
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64