miRBase entry: ppy-mir-653

Stem-loop ppy-mir-653

Accession

MI0015128

Description

Pongo pygmaeus ppy-mir-653 precursor miRNA

Sequence

uucauuccuucaGUGUUGAAACAAUCUCUACUGaaccagcuucaaacaaguucacuggaguuuguuucaauauugcaagaaugauaagauggaagc
.((((((...((((((((((((((.(((((.(((((.............))))).))))).))))))))))))))...))))))............

Structure

-----------u      cuu              U     C     cagcu 
            ucauuc   caGUGUUGAAACAA CUCUA UGaac     u
            ||||||   |||||||||||||| ||||| |||||     c
            aguaag   guuauaacuuuguu gaggu acuug     a
cgaagguagaau      aac              u     c     aacaa

Annotation confidence Not enough data

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Genome context

chr7: 82623685-82623780 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-653

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-653

Accession	MIMAT0016086
Description	Pongo pygmaeus ppy-miR-653 mature miRNA
Sequence	13 - GUGUUGAAACAAUCUCUACUG - 33
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64