miRBase entry: ppy-mir-655

Stem-loop ppy-mir-655

Accession

MI0015130

Description

Pongo pygmaeus ppy-mir-655 precursor miRNA

Sequence

aacuauucaaggauauuugaggagagguuauccguguuauguucgcuucauucaucaugaAUAAUACAUGGUUAACCUCUUUuugaauaucagacuc
...........(((((((((((((((((((.((((((..((((((............))))))..)))))).)))))))))))))))))))......

Structure

aacuauucaag                   u      ua      cuuca 
           gauauuugaggagagguua ccgugu  uguucg     u
           ||||||||||||||||||| ||||||  ||||||      
           cuauaaguuUUUCUCCAAU GGUACA  AUAagu     u
-----cucaga                   U      UA      acuac

Annotation confidence Not enough data

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Genome context

chr14: 102611698-102611794 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from ppy-mir-655

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-655

Accession	MIMAT0016089
Description	Pongo pygmaeus ppy-miR-655 mature miRNA
Sequence	61 - AUAAUACAUGGUUAACCUCUUU - 82
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64