Stem-loop ppy-mir-671

Accession

MI0015137

Description

Pongo pygmaeus ppy-mir-671 precursor miRNA

Sequence

gcaggugaacuggcaggccaggaagaggAGGAAGCCCUGGAGGGGCUGGAGgugauggauguuuuccUCCGGUUCUCAGGGCUCCACCucuuucgggccguagagccagggcuggugc
(((...(..(((((.((((.((((((((.(((.((((((..(((((((((((.((.......)).)))))))))))))))))))).)))))))).)))).....)))))..)...)))

Structure

   ggu aa     ----a    a        A   A      GA           u  ug 
gca   g  cuggc     ggcc ggaagagg GGA GCCCUG  GGGGCUGGAGg ga  g
|||   |  |||||     |||| |||||||| ||| ||||||  ||||||||||| ||  a
cgu   c  gaccg     ccgg cuuucuCC CCU CGGGAC  UCUUGGCCUcc uu  u
   ggu gg     agaug    g        A   -      --           u  ug 

Annotation confidence Not enough data

Genome context

chr7: 148926025-148926142 [+]

Mature ppy-miR-671-5p

• Accession: MIMAT0016096
• Description: Pongo pygmaeus ppy-miR-671-5p mature miRNA
• Sequence: 29 - AGGAAGCCCUGGAGGGGCUGGAG - 51
• Evidence: not_experimental

Mature ppy-miR-671-3p

• Accession: MIMAT0016097
• Description: Pongo pygmaeus ppy-miR-671-3p mature miRNA
• Sequence: 68 - UCCGGUUCUCAGGGCUCCACC - 88
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64