miRBase entry: ppy-mir-891b

Stem-loop ppy-mir-891b

Accession

MI0015162

Description

Pongo pygmaeus ppy-mir-891b precursor miRNA

Sequence

ccuuaauccuUGCAACUUACCUGAGUCAUUGAuucaguaaaacauucaauggcacauguuuguuguuagggucaaaaga
.(((.(((((.(((((..((.((.((((((((.............)))))))).)).))..))))).)))))...))).

Structure

c   --a     U     UU  C  A        uucag 
 cuu   auccu GCAAC  AC UG GUCAUUGA     u
 |||   ||||| |||||  || || ||||||||     a
 gaa   uggga uguug  ug ac cgguaacu     a
a   aac     u     uu  u  a        uacaa

Annotation confidence Not enough data

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Genome context

chrX: 145874810-145874888 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from ppy-mir-891b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-891b

Accession	MIMAT0016127
Description	Pongo pygmaeus ppy-miR-891b mature miRNA
Sequence	11 - UGCAACUUACCUGAGUCAUUGA - 32
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64