miRBase entry: ppy-mir-1185-2

Stem-loop ppy-mir-1185-2

Accession

MI0015184

Description

Pongo pygmaeus ppy-mir-1185-2 precursor miRNA

Sequence

uuugguacuuaaagAGAGGAUACCCUUUGUAUGUUcacuugauuaauggcgaauauacagggggagacucuuauuugcguaucaaa
.(((((((.(((((((((..(.((((((((((((((.((........)).)))))))))))))))..))))).)))).))))))).

Structure

u       u    -     GA A              a  uga 
 uugguac uaaa gAGAG  U CCCUUUGUAUGUUc cu   u
 ||||||| |||| |||||  | |||||||||||||| ||    
 aacuaug guuu uucuc  a gggggacauauaag gg   u
a       c    a     ag -              c  uaa

Annotation confidence Not enough data

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Genome context

chr14: 102606330-102606415 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from ppy-mir-1185-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-1185

Accession	MIMAT0016148
Description	Pongo pygmaeus ppy-miR-1185 mature miRNA
Sequence	15 - AGAGGAUACCCUUUGUAUGUU - 35
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64