Stem-loop ppy-mir-1225

Accession

MI0015194

Description

Pongo pygmaeus ppy-mir-1225 precursor miRNA

Sequence

GUGGGUACGGCCCAGUGGGGGGgagagggacacgcccugggcucugcccagggugcagccggacugacUGAGCCCCUGUGCCGCCCCCAG
.((((..((((.(((.(((((..((..((...((((((((((...))))))))))...))...))..))...)))))).))))..)))).

Structure

G    UA    C   U   ---  Gg  -ag  aca          u 
 UGGG  CGGC CAG GGG   GG  ag   gg   cgcccugggc  
 ||||  |||| ||| |||   ||  ||   ||   |||||||||| c
 ACCC  GCCG GUC CCC   Uc  uc   cc   gugggacccg  
G    CC    U   -   GAG  ag  agg  gac          u 

Annotation confidence Not enough data

Genome context

chr16: 2162434-2162523 [-]

Mature ppy-miR-1225-5p

• Accession: MIMAT0016160
• Description: Pongo pygmaeus ppy-miR-1225-5p mature miRNA
• Sequence: 1 - GUGGGUACGGCCCAGUGGGGGG - 22
• Evidence: not_experimental

Mature ppy-miR-1225-3p

• Accession: MIMAT0016161
• Description: Pongo pygmaeus ppy-miR-1225-3p mature miRNA
• Sequence: 69 - UGAGCCCCUGUGCCGCCCCCAG - 90
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64