miRBase entry: ppy-mir-1323

Stem-loop ppy-mir-1323

Accession

MI0015267

Description

Pongo pygmaeus ppy-mir-1323 precursor miRNA

Sequence

acugagguccUCAAAACUGAGGGGCAUUUUCUgugguuugaaaggaaagugcacccaguuuuggggaugucaa
..(((.(((((((((((((.((.(((((((((...........))))))))).))))))))))))))).))).

Structure

ac   g             A  G         gugg 
  uga guccUCAAAACUG GG GCAUUUUCU    u
  ||| ||||||||||||| || |||||||||    u
  acu uagggguuuugac cc cgugaaagg    u
-a   g             -  a         aaag

Annotation confidence Not enough data

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Genome context

chr19: 55446306-55446378 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ppy-mir-1323

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-1323

Accession	MIMAT0016229
Description	Pongo pygmaeus ppy-miR-1323 mature miRNA
Sequence	11 - UCAAAACUGAGGGGCAUUUUCU - 32
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64