miRBase entry: ppy-mir-1912

Stem-loop ppy-mir-1912

Accession

MI0015278

Description

Pongo pygmaeus ppy-mir-1912 precursor miRNA

Sequence

cucuaggaugugcucauugcaugggcuguguauaguauuauucaaUACCCAGAGCAUGCAGUGUGAAcauaauagagauu
(((((..((((.(.(((((((((..(((.((((.(.......).)))).)))..))))))))).).))))..)))))...

Structure

---     gg    g u         gg   u    a ua 
   cucua  augu c cauugcaug  cug guau g  u
   |||||  |||| | |||||||||  ||| |||| |  u
   gagau  uacA G GUGACGUAC  GAC CAUa c  a
uua     aa    A U         GA   C    a uu

Annotation confidence Not enough data

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Genome context

chrX: 113621721-113621800 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-1912

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-1912

Accession	MIMAT0016240
Description	Pongo pygmaeus ppy-miR-1912 mature miRNA
Sequence	46 - UACCCAGAGCAUGCAGUGUGAA - 67
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64