Stem-loop ppy-mir-1914

Accession

MI0015280

Description

Pongo pygmaeus ppy-mir-1914 precursor miRNA

Sequence

cgugugagcccgCCCUGUGCCCGUCCCACUUCUGcugcugcuuagcucaggaggggucccgcacugggaggggcccucac
.(((.(.((((.(((.((((..(.(((.((((((..(((....))).))))))))).)..)))).)))..)))).).)))

Structure

c   u a    -g   U    CC U   A      cu   g 
 gug g gccc  CCC GUGC  G CCC CUUCUG  gcu c
 ||| | ||||  ||| ||||  | ||| ||||||  |||  
 cac c cggg  ggg cacg  c ggg gaggac  cga u
-   u c    ga   u    cc u   -      -u   u 

Annotation confidence Not enough data

Genome context

chr20: 62381460-62381539 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-1914

Mature ppy-miR-1914

• Accession: MIMAT0016242
• Description: Pongo pygmaeus ppy-miR-1914 mature miRNA
• Sequence: 13 - CCCUGUGCCCGUCCCACUUCUG - 34
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64