Stem-loop sja-mir-8

Accession

MI0015286

Description

Schistosoma japonicum sja-mir-8 precursor miRNA

Literature search

4 open access papers mention sja-mir-8
(16 sentences)

Sequence

augaguauggCAUCUUACUAAUAGUAUUUGAuaaagaauuuucUAAUACUGUUAGGUAAAGAUGCCagcucacuuc
.(((((.(((((((((.(((((((((((.((..........)).)))))))))))...))))))))))))))....

Structure

---a     a         --A           U  uaaa 
    ugagu uggCAUCUU   CUAAUAGUAUU GA    g
    ||||| |||||||||   ||||||||||| ||     
    acucg aCCGUAGAA   GAUUGUCAUAA cu    a
cuuc     -         AUG           U  uuua 

Annotation confidence Not enough data

Genome context

CABF01051237.1: 644-719 [+]

Mature sja-miR-8-5p

• Accession: MIMAT0016251
• Description: Schistosoma japonicum sja-miR-8-5p mature miRNA
• Sequence: 11 - CAUCUUACUAAUAGUAUUUGA - 31
• Evidence: experimental ; Illumina [1]

Mature sja-miR-8-3p

• Accession: MIMAT0016252
• Description: Schistosoma japonicum sja-miR-8-3p mature miRNA
• Sequence: 44 - UAAUACUGUUAGGUAAAGAUGCC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596