Stem-loop sja-mir-31

Accession

MI0015288

Description

Schistosoma japonicum sja-mir-31 precursor miRNA

Literature search

4 open access papers mention sja-mir-31
(43 sentences)

Sequence

uauuuguuguUGGCAAGAUUACGGCGAAGCUGAaucaaauuuaaaauguuucAGCUUCACUUUAUUUUGCCAAuaaagguagc
(((((.(((((((((((((...((.(((((((((.((.........)).))))))))).))..))))))))))))))))))..

Structure

--     g             UAC  C         u  aau 
  uauuu uuguUGGCAAGAU   GG GAAGCUGAa ca   u
  ||||| |||||||||||||   || ||||||||| ||   u
  augga aauAACCGUUUUA   UC CUUCGAcuu gu   a
cg     -             -UU  A         u  aaa 

Annotation confidence Not enough data

Genome context

CABF01027063.1: 2598-2680 [-]

Mature sja-miR-31-5p

• Accession: MIMAT0016255
• Description: Schistosoma japonicum sja-miR-31-5p mature miRNA
• Sequence: 11 - UGGCAAGAUUACGGCGAAGCUGA - 33
• Evidence: experimental ; Illumina [1]

Mature sja-miR-31-3p

• Accession: MIMAT0016256
• Description: Schistosoma japonicum sja-miR-31-3p mature miRNA
• Sequence: 53 - AGCUUCACUUUAUUUUGCCAA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596