Stem-loop sja-mir-310

Accession

MI0015298

Description

Schistosoma japonicum sja-mir-310 precursor miRNA

Literature search

1 open access papers mention sja-mir-310
(2 sentences)

Sequence

guagagaauugggagauauagucaagaugacgcgacucucguggagaguacuuauccgaagaugacuucaucgaaaacgucagugguuuauggucggugaAUAUUGCAAAUUCCCGGCCUUUgauggaauguugaaaaugac
.(((((..((((((......((((...))))...((((((...))))))..(((((....))))).((((((((((((.......))))....))))))))..........)))))).)))))...................

Structure

------------------g     aa      gauauagucaagaugacgcgacucucguggagaguacuuauccgaagaugac        ----    gu 
                   uagag  uuggga                                                    uucaucga    aaac  c
                   |||||  ||||||                                                    ||||||||    ||||  a
                   gUUUC  GGCCCU                                                    Aaguggcu    uuug  g
caguaaaaguuguaaggua     -C      ------------------------------------------UAAACGUUAU        ggua    gu 

Annotation confidence Not enough data

Genome context

CABF01020650.1: 1788-1929 [-]

Mature sja-miR-310

• Accession: MIMAT0016271
• Description: Schistosoma japonicum sja-miR-310 mature miRNA
• Sequence: 101 - AUAUUGCAAAUUCCCGGCCUUU - 122
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596