Stem-loop sja-mir-3481

Accession

MI0015304

Description

Schistosoma japonicum sja-mir-3481 precursor miRNA

Sequence

gauguaacuuUUCUUUACAGUGGGUCUCUUUguguucuuuugcgauggcauuugaugcaaaGGUGAUCUUUGUAUGGACAAauuuuuaugg
...........(((.(((((.(((((((((((((((....(((....)))...)))))))))).)))))))))).))).............

Structure

--gauguaacuuU   U     U     -          cuuu   g 
             UCU UACAG GGGUC UCUUUguguu    ugc a
             ||| ||||| ||||| ||||||||||    |||  
             AGG AUGUU UCUAG GGaaacguag    acg u
gguauuuuuaAAC   U     -     U          -uuu   g 

Annotation confidence Not enough data

Genome context

CABF01019045.1: 21887-21977 [-]

Mature sja-miR-3481-5p

• Accession: MIMAT0016282
• Description: Schistosoma japonicum sja-miR-3481-5p mature miRNA
• Sequence: 11 - UUCUUUACAGUGGGUCUCUUU - 31
• Evidence: experimental ; Illumina [1]

Mature sja-miR-3481-3p

• Accession: MIMAT0016283
• Description: Schistosoma japonicum sja-miR-3481-3p mature miRNA
• Sequence: 62 - GGUGAUCUUUGUAUGGACAA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596