Stem-loop sja-mir-3482

Accession

MI0015305

Description

Schistosoma japonicum sja-mir-3482 precursor miRNA

Sequence

cuaguauggaACUCCUCGGCAGUGUUCGCAAACCUgaagcccguggggcagaaucuaggAUGCGCACUGCCGAGGAUUUCcauacuagga
(((((((((((.((((((((((((..((((..(((((.((((...))))....)).))).)))))))))))))))).)))))))))))..

Structure

--           C            UU    AA   -  ---a    g 
  cuaguauggaA UCCUCGGCAGUG  CGCA  CCU ga    gccc  
  ||||||||||| ||||||||||||  ||||  ||| ||    |||| u
  gaucauacCUU AGGAGCCGUCAC  GCGU  gga cu    cggg  
ag           U            --    -A   u  aaga    g 

Annotation confidence Not enough data

Genome context

CABF01027502.1: 4305-4394 [-]

Mature sja-miR-3482-5p

• Accession: MIMAT0016284
• Description: Schistosoma japonicum sja-miR-3482-5p mature miRNA
• Sequence: 11 - ACUCCUCGGCAGUGUUCGCAAACCU - 35
• Evidence: experimental ; Illumina [1]

Mature sja-miR-3482-3p

• Accession: MIMAT0016285
• Description: Schistosoma japonicum sja-miR-3482-3p mature miRNA
• Sequence: 60 - AUGCGCACUGCCGAGGAUUUC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596