Stem-loop sja-mir-3484

Accession

MI0015307

Description

Schistosoma japonicum sja-mir-3484 precursor miRNA

Sequence

gugacagguaUUAGGUUUCGUUGUUUGUAUUUaucaauuucuaacacAUACAAACAGCUAAACUUAUaaccuaucuc
..((.((((..(((((((.(((((((((((.................))))))))))).)))))))..)))).))..

Structure

gu  c    aU       C           UUaucaa 
  ga aggu  UAGGUUU GUUGUUUGUAU       u
  || ||||  ||||||| |||||||||||       u
  cu ucca  AUUCAAA CGACAAACAUA       u
cu  a    aU       U           cacaauc 

Annotation confidence Not enough data

Genome context

CABF01005891.1: 21588-21664 [-]

Mature sja-miR-3484-5p

• Accession: MIMAT0016288
• Description: Schistosoma japonicum sja-miR-3484-5p mature miRNA
• Sequence: 11 - UUAGGUUUCGUUGUUUGUAUUU - 32
• Evidence: experimental ; Illumina [1]

Mature sja-miR-3484-3p

• Accession: MIMAT0016289
• Description: Schistosoma japonicum sja-miR-3484-3p mature miRNA
• Sequence: 48 - AUACAAACAGCUAAACUUAU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596