Stem-loop sja-mir-3486

Accession

MI0015309

Description

Schistosoma japonicum sja-mir-3486 precursor miRNA

Sequence

auuggguccgugcUCUCUGUGUUGAAUUUGAggaucuugcucuuuccauuguguaugcucAGGUCUAUUGAUGCUGAGAUUacugcuacgu
....(((..(((.((((.((((((((((((((.((...((.(........).)))).)))))))...))))))).)))).))).)))....

Structure

auug   cc   c    U       ---       g  cuu  u uuu 
    ggu  gug UCUC GUGUUGA   AUUUGAg au   gc c   c
    |||  ||| |||| |||||||   ||||||| ||   || |    
    ucg  caU AGAG CGUAGUU   UGGAcuc ua   ug g   c
ugca   -u   U    U       AUC       g  ---  u uua 

Annotation confidence Not enough data

Genome context

CABF01026031.1: 3515-3605 [-]

Mature sja-miR-3486-5p

• Accession: MIMAT0016292
• Description: Schistosoma japonicum sja-miR-3486-5p mature miRNA
• Sequence: 14 - UCUCUGUGUUGAAUUUGA - 31
• Evidence: experimental ; Illumina [1]

Mature sja-miR-3486-3p

• Accession: MIMAT0016293
• Description: Schistosoma japonicum sja-miR-3486-3p mature miRNA
• Sequence: 61 - AGGUCUAUUGAUGCUGAGAUU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596