Stem-loop sja-mir-3490

Accession

MI0015314

Description

Schistosoma japonicum sja-mir-3490 precursor miRNA

Sequence

guguuauugugcauucuuacgacaagaaauuggagcauucaaucguuuucugacgaguuguuguuauUCCUUUGGGUUGUGGGGAUAauaaucaagg
.....(((((..(((((((((((..(((...((((((..((((((((....))))).))).)))...))))))..))))))))))).))))).....

Structure

guguu     gc           aa   auu   ---   uu   -     u 
     auugu  auucuuacgac  gaa   gga   gca  caa ucguu u
     |||||  |||||||||||  |||   |||   |||  ||| |||||  
     uaaua  UAGGGGUGUUG  UUU   CCU   ugu  guu agcag c
ggaac     -A           GG   ---   uau   -u   g     u 

Annotation confidence Not enough data

Genome context

CABF01035592.1: 847-943 [-]

Mature sja-miR-3490

• Accession: MIMAT0016299
• Description: Schistosoma japonicum sja-miR-3490 mature miRNA
• Sequence: 68 - UCCUUUGGGUUGUGGGGAUA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596