Stem-loop sja-mir-3494

Accession

MI0015318

Description

Schistosoma japonicum sja-mir-3494 precursor miRNA

Sequence

ggagagacucGACAGAAGACUGCCGCUCAUUUuggaguacauguuuaaacucagaucauaccuuaguacgagcgcguauuugucugcgucucaau
...(((((.(((((((....(((((((((((..((......((........)).......))..)))..))))).))))))))).).)))))...

Structure

gga     u -      AGAC   -     --   Uu  -aguaca  uuu 
   gagac c GACAGA    UGC CGCUC  AUU  gg       ug   a
   ||||| | ||||||    ||| |||||  |||  ||       ||    
   cucug g cuguuu    aug gcgag  uga  cc       ac   a
uaa     c u      ----   c     ca   uu  auacuag  uca 

Annotation confidence Not enough data

Genome context

CABF01006689.1: 6074-6168 [-]

Mature sja-miR-3494

• Accession: MIMAT0016303
• Description: Schistosoma japonicum sja-miR-3494 mature miRNA
• Sequence: 11 - GACAGAAGACUGCCGCUCAUUU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596