Stem-loop sja-mir-3495

Accession

MI0015319

Description

Schistosoma japonicum sja-mir-3495 precursor miRNA

Sequence

agaugcagacuacaugguuggggcccacguggugaucguaacaaaugcuuaaagaccuuaugguUCAAAAUCGUUGGCAAUGGCUcaggugcauc
.((((((..((....(((((..(((.(((...(((((((((....(......)....)))))).)))....))).)))..))))).)).))))))

Structure

a      ga  acau     gg   c   -ugg   -      caaa gc 
 gaugca  cu    gguug  gcc acg    uga ucguaa    u  u
 ||||||  ||    |||||  ||| |||    ||| ||||||    |   
 cuacgu  ga    UCGGU  CGG UGC    ACU gguauu    a  u
-      -g  ---c     AA   U   UAAA   u      ccag aa 

Annotation confidence Not enough data

Genome context

CABF01019868.1: 1620-1714 [-]

Mature sja-miR-3495

• Accession: MIMAT0016304
• Description: Schistosoma japonicum sja-miR-3495 mature miRNA
• Sequence: 65 - UCAAAAUCGUUGGCAAUGGCU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596