Stem-loop sja-mir-3498

Accession

MI0015322

Description

Schistosoma japonicum sja-mir-3498 precursor miRNA

Sequence

aguagcugcuUAGACGGUUUGAAACAUGGAgaaauaagcucuuucugguacguauuucucacauguuccacgacugcaucacaugaagcugacug
(((((((.....(((((((((.((((((((((((((.(..((....))..).)))))))).)))))).)).)))))..))......)))).))).

Structure

-   -    -gcuUA  --     -  A      -        a cu  u 
 agu agcu      GA  CGGUU UG AACAUG GAgaaaua g  cu u
 ||| ||||      ||  ||||| || |||||| |||||||| |  ||  
 uca ucga      cu  gucag ac uuguac cucuuuau c  gg c
g   g    aguaca  ac     c  c      a        g au  u 

Annotation confidence Not enough data

Genome context

CABF01009810.1: 3740-3834 [+]

Mature sja-miR-3498

• Accession: MIMAT0016307
• Description: Schistosoma japonicum sja-miR-3498 mature miRNA
• Sequence: 11 - UAGACGGUUUGAAACAUGGA - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596