Stem-loop sja-mir-3499

Accession

MI0015323

Description

Schistosoma japonicum sja-mir-3499 precursor miRNA

Sequence

uucguugagagacggauaucucgccugugccauaagugucguaaguuggcgaaugccgaucgggccuUCUGAAUCCGUGCUGAGAUUUUguccgacacc
...((((...((((((.((((((((.(...((.(((.(((....((((((....))))))..)))))).))...).).)).)))))))))))))))...

Structure

uuc    aga      u     -  - u ugc  u   u   guaa      g 
   guug   gacgga aucuc gc c g   ca aag guc    guuggc a
   ||||   |||||| ||||| || | |   || ||| |||    ||||||  
   cagc   cugUUU UAGAG CG G C   GU Uuc cgg    uagccg a
cca    ---      -     U  U C UAA  C   -   --gc      u 

Annotation confidence Not enough data

Genome context

CABF01040210.1: 1456-1554 [+]

Mature sja-miR-3499

• Accession: MIMAT0016308
• Description: Schistosoma japonicum sja-miR-3499 mature miRNA
• Sequence: 68 - UCUGAAUCCGUGCUGAGAUUUU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596