Stem-loop sja-mir-3500

Accession

MI0015324

Description

Schistosoma japonicum sja-mir-3500 precursor miRNA

Sequence

uucgcaggaaAGGAGAUCGGUGGUAGAUUGUgauuguuugcauuaauuguaauuaaucauguuccuuuuuuucugagua
....(((((((((((..........((.((((((((.(((((.....))))).)))))))).)))))))))))))....

Structure

uucg           AUCGGUGGUA  U        u     u 
    caggaaAGGAG          GA UGUgauug uugca u
    |||||||||||          || |||||||| ||||| a
    gucuuuuuuuc          cu guacuaau aaugu a
auga           ----------  u        u     u 

Annotation confidence Not enough data

Genome context

CABF01024340.1: 784-862 [+]

Mature sja-miR-3500

• Accession: MIMAT0016309
• Description: Schistosoma japonicum sja-miR-3500 mature miRNA
• Sequence: 11 - AGGAGAUCGGUGGUAGAUUGU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596