Stem-loop sja-mir-3502

Accession

MI0015326

Description

Schistosoma japonicum sja-mir-3502 precursor miRNA

Sequence

ccuuaucgauuucauggggcggcguauccauacgugaucucuagcuguauauacugguccuugcaaGUGACGAUCGUACAUGUCUUguugaugagc
.(((((((((..((((..(((((((...(((..((((...((((.........))))...))))..)))))).)))).))))....))))))))).

Structure

c         --uu    gg    -   auc   ac    ucu    cug 
 cuuaucgau    caug  gcgg cgu   cau  guga   cuag   u
 |||||||||    ||||  |||| |||   |||  ||||   ||||   a
 gaguaguug    GUAC  UGCU GCA   GUG  cguu   gguc   u
c         UUCU    -A    A   ---   aa    ccu    aua 

Annotation confidence Not enough data

Genome context

CABF01045081.1: 4698-4793 [+]

Mature sja-miR-3502

• Accession: MIMAT0016311
• Description: Schistosoma japonicum sja-miR-3502 mature miRNA
• Sequence: 67 - GUGACGAUCGUACAUGUCUU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596