Stem-loop sja-mir-3505

Accession

MI0015329

Description

Schistosoma japonicum sja-mir-3505 precursor miRNA

Sequence

ugcgcaagugUGACUGUCUGGACACAGUAGUUUggcgguaaacgcuguggcguuugacacgaaacagacugaguuccaaccguag
............((.((..((((.((((.((((.(.(..((((((....))))))..).).))))..)))).))))..)).))..

Structure

ugcgcaagugUG  U  CU    A    -A    g c gu      u 
            AC GU  GGAC CAGU  GUUU g g  aaacgc g
            || ||  |||| ||||  |||| | |  ||||||  
            ug ca  cuug guca  caaa c c  uuugcg u
----------ga  c  ac    a    ga    g a ag      g 

Annotation confidence Not enough data

Genome context

CABF01006891.1: 2135-2219 [-]

Mature sja-miR-3505

• Accession: MIMAT0016314
• Description: Schistosoma japonicum sja-miR-3505 mature miRNA
• Sequence: 11 - UGACUGUCUGGACACAGUAGUUU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596