Stem-loop sja-mir-3506

Accession

MI0015330

Description

Schistosoma japonicum sja-mir-3506 precursor miRNA

Sequence

uaguuuuugaccaucgaugucuucgaaucaucguuuguguuagcugggauuacaaaguagguaauaACGAGGUUAGACGACGAGUGuuaugaaucu
..((((.((((..(((.(((((...((((.((((...(((((.(((...........))).)))))))))))))))))).)))..)))).))))..

Structure

ua    u    ca   a     ucg    a    uug     g   ggau 
  guuu ugac  ucg ugucu   aauc ucgu   uguua cug    u
  |||| ||||  ||| |||||   |||| ||||   ||||| |||    a
  uaag auuG  AGC GCAGA   UUGG AGCA   auaau gau    c
uc    u    UG   A     ---    -    ---     g   gaaa 

Annotation confidence Not enough data

Genome context

CABF01045213.1: 2007-2102 [+]

Mature sja-miR-3506

• Accession: MIMAT0016315
• Description: Schistosoma japonicum sja-miR-3506 mature miRNA
• Sequence: 67 - ACGAGGUUAGACGACGAGUG - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596